Publications

2017年关佶红课题组论文/专利/软件著作权情况

  1. Bin Xu, Jihong Guan, Yang Wang, Zewei Wang. Essential Protein Detection by Random Walk on Weighted Protein-Protein Interaction Networks[J]. IEEE/ACM Trans Comput Biol Bioinform, 2017, PP(99):1-1.
  2. Jia Shi, Yifeng Luo, Shuigeng Zhou, Jihong Guan. A Graph Matching Based Method for Dynamic Passenger-Centered Ridesharing[C]. // The 27th International Conference on Database and Expert Systems Applications(DEXA 2017). Auguest 28th-31th, 2017, Lyon, France.
  3. Yifeng Luo, Junshi Guo, Jiaye Zhu, Jihong Guan, Shuigeng Zhou. Supporting Cost-Efficient Multi-tenant Database Services with Service Level Objectives (SLOs)[C]. //The 22nd International Conference on Database Systems for Advanced Applications(DASFAA 2017). March 27th-30th, 2017, Suzhou, China.
  4. Hao Zhang, Shuigeng Zhou, Kun Zhang, Jihong Guan. Causal Discovery Using Regression-Based Conditional Independence Tests[C]// The Thirty-First AAAI Conference on Artificial Intelligence(AAAI. 2017), February 4th-9th, 2017, San Francisco, USA.
  5. Wengen Li, Jiannong Cao, Jihong Guan, Man Lung Yiu, Shuigeng Zhou. Efficient Retrieval of Bounded-Cost Informative Routes[J]. IEEE Transactions on Knowledge and Data Engineering, 2017, 29(10): 2182-2196.
  6. Hui Liu, Shuigeng Zhou, Wai Lam, Jihong Guan. A new hybrid method for learning bayesian networks: Separation and reunion[J]. Knowledge-Based Systems, 2017, 121: 185-197.
  7. Weihua Zhan, Jihong Guan, Zhongzhi Zhang. A New Method for Extracting the Hierarchical Organization of Networks[J]. International Journal of Information Technology and Decision Making, 2017, 16(5): 1359-1386.
  8. Yichao Zhang, Xing Li, M. A. Aziz-Alaoui, Cyrille Bertelle, Jihong Guan, Shuigeng Zhou. Knowledge diffusion in complex networks[J]. Concurrency and Computation: Practice and Experience, 2017, 29(3).
  9. Zhanzhan Cheng, Kai Huang, Yang Wang, Hui Liu, Jihong Guan, Shuigeng Zhou. Selecting high-quality negative samples for effectively predicting protein-RNA interactions[J]. BMC systems biology, 2017, 11(S-2): 9.
  10. Xiaoxiong Zheng, Yang Wang, Kai Tian, Jiaogen Zhou, Jihong Guan, Libo Luo, Shuigeng Zhou. Fusing multiple protein-protein similarity networks to effectively predict lncRNA-protein interactions[J]. BMC bioinformatics, 2017, 18(S-12): 11-18.
  11. Bin Xu, Yang Wang, Zewei Wang, Jiaogen Zhou, Shuigeng Zhou, Jihong Guan. An effective approach to detecting both small and large complexes from protein-protein interaction networks[J]. BMC Bioinformatics, 2017, 18(S-12): 19-28.
  12. Yanglan Gan, Han Tao, Jihong Guan, Shuigeng Zhou. iHMS: a database integrating human histone modification data across developmental stages and tissues[J]. BMC bioinformatics, 2017, 18(1): 103.
  13. Hongda Bu, Yanglan Gan, Yang Wang, Shuigeng Zhou, Jihong Guan. A new method for enhancer prediction based on deep belief network[J]. BMC Bioinformatics, 2017, 18(S-12): 99-105.
  14. Jiasheng Wang, Yichao Zhang, Jihong Guan, Shuigeng Zhou. Divide-and-conquer Tournament on Social Networks. Scientific Reports[J], 2017.
  15. Ying Xu, Jiaogen Zhou,Shuigeng Zhou and Jihong Guan. CPredictor3.0: Effectively detecting protein complexes from PPI networks with expression data and functional annotations[C]. //The 16th International Conference on Bioinformatics(InCoB 2017), paper ID: 46, September 20th-22th, 2017, Shenzhen, China.
  16. Yunjia Shi, Heng Yao, Jihong Guan, Shuigeng Zhou. Effectively Detecting Protein Complexes in Weighted Dynamic PPI Networks[C]. //The 2nd CCF Bioinformatics Conference(CBC 2017), paper ID: 89, October 13th-15th, 2017, Changsha, China.
  17. Shengbing Pei, Jihong Guan, Shuigeng Zhou. Fusion Analysis of Resting State Networks And Its Application to Alzheimer's Disease[C]. //The 2nd CCF Bioinformatics Conference(CBC 2017), paper ID: 91, October 13th-15th, 2017, Changsha, China.
  18. Jiaye Zhu, Yinglong Song, Jihong Guan, Shuigeng Zhou. Alignment of Dynamic Protein-Protein Interaction Networks Based on Segment Tree Optimization [C]. // The 2nd CCF Bioinformatics Conference(CBC 2017), paper ID: 88, October 13th-15th, 2017, Changsha, China.

专利申请

  1. 一种金融市场在线投资组合选择方法,2017106891427,20170814,周水庚,叶泽坤,关佶红
  2. 一种大数据查询处理的隐私保护方法,201710689147X,20170814,周水庚,刘超斌,关佶红
  3. 一种金融交易网络演化建模方法,2017107033705,20170816,周水庚,王俊杰,关佶红,张浩
  4. 一种金融领域关联交易的检测方法,2017107158838,20170821,周水庚,王俊杰,关佶红

软件著作权

  1. 周水庚,叶泽坤,关佶红,在线投资组合选择集成系统【简称OnlinePS】V1.0,2017SR482158

关佶红2016年发表/录用论文

  1. Wengen Li, Jihong Guan, Xiang Lian, Shuigeng Zhou and Jiannong Cao. Probabilistic Time-Constrained Paths Search over Uncertain Road Networks. IEEE Transactions on Service Computing, 99:1, 21 June 2016. DOI: 10.1109/TSC.2016.2582692
  2. Bin Xu, Yang Wang, Zewei Wang and Jihong Guan*, Essential Protein Detection by Random Walk on Weighted Protein-Protein Interaction Networks, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2016. {Accepted}.
  3. Zhanzhan Cheng, Shuigeng Zhou, Yang Wang, Hui Liu, Jihong Guan, and Yi-Ping Phoebe Chen. Effectively Identifying Compound-Protein Interactions by Learning from Positive and Unlabeled Examples. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 18 May 2016. DOI: 10.1109/TCBB.2016.2570211
  4. Yanglan Gan, Han Tao, Guobing Zou, Cairong Yan and Jihong Guan*, Dynamic epigenetic mode analysis using spatial temporal clustering, BMC Bioinformatics, 2016. (in press)
  5. Hui Liu, Yinglong Song, Jihong Guan, Libo Luo and Ziheng Zhuang, Inferring new indications for approved drugs via random walk on drug-disease heterogenous networks,BMC Bioinformatics, 2016. (in press)
  6. Hui Liu, Mengmeng Guo, Ting Xue, Jihong Guan, Libo Luo and Ziheng Zhuang, Screening lifespan-extending drugs in Caenorhabditis elegans via label propagation on drug-protein networks, BMC Systems Biology, 2016. (in press)
  7. Yichao Zhang, Xing Li, M. A. Aziz-alaoui, Cyrille Bertelle, Jihong Guan, Shuigeng Zhou. Knowledge Diffusion in Complex Networks. Concurrency and Computation: Practice and Experience, 24 February 2016. DOI: 10.1002/cpe.3791
  8. Kai Tian, Mingyu Shao, Yang Wang, Jihong Guan, Shuigeng Zhou. Boosting compound-protein interaction prediction by deep learning. Methods, volume 110, Pages 64–72, 1 November 2016.
  9. Qiuyang Wu, Jihong Guan*, and Shuigeng Zhou. Histone Modification Patterns in Highly Differentiation Cells. Neurocomputing, 206: 42-49, 2016.
  10. Yun Lu, Yanglan Gan, Jihong Guan*, and Shuigeng Zhou. An integrative analysis of nucleosome occupancy and positioning using diverse sequence dependent properties. Neurocomputing, 206: 35-41, 2016.
  11. Xin Geng, Jiaogen Zhou, Jihong Guan*. Side-chain dynamics analysis of KE07 series. Computational Biology and Chemistry, Elsevier, Available online 15 October 2016.
  12. Hui Liu, Zhanzhan Cheng, Jiangjiang Sun, Jihong Guan, Jie Zheng and Shuigeng Zhou. Sparse linear modeling kinase inhibition network for predicting combinatorial drug sensitivity in cancer cells. Current Bioinformatics, 2016. (Accepted)
  13. Weihua Zhan, Jihong Guan, Huahui Chen, Jun Niu, Guang Jin, Identifying overlapping communities in networks using evolutionary method, Physica A: Statistical Mechanics and its Applications, Volume 442, 15 January 2016, Pages 182-192.
  14. Hao Zhang, Jihong Guan and Shuigeng Zhou. Causal Discovery Using Regression-based Conditional Independence Tests. To appear in Proceedings of AAAI 2017, February 2017"
  15. Wengen Li, Jiannong Cao, Jihong Guan, Man Lung Yiu, Shuigeng Zhou. Retrieving Routes of Interest over Road Networks. In: Proceedings of WAIM 2016, Part I, LNCS vol. 9658, pages 109-123, Springer, 2016.
  16. Yifu Huang, Kai Huang, Yang Wang, Hao Zhang, Jihong Guan, Shuigeng Zhou. Exploiting Twitter Moods to Boost Financial Trend Prediction Based on Deep Network Models. In: Proceedings of 2016 International Conference on Intelligent Computation (ICIC’16), LNCS vol. 9773, pages 449-460, Springer, 2016.
  17. Hongda Bu, Yanglan Gan, Yang Wang, Shuigeng Zhou*, Jihong Guan. EnhancerDBN: An Enhancer Prediction Method Based on Deep Belief Network. In: Proceedings of Bioinformatics Research and Applications: 12th International Symposium, ISBRA 2016, Minsk, Belarus, June 5-8, 2016, Proceedings. Springer, 2016, 9683: 312.
  18. Bin Xu, Jihong Guan, Yang Wang, Shuigeng Zhou. CPredictor2.0: Effectively Detecting Both Small and Large Complexes from Protein-Protein Interaction Networks. In: Proceedings of Bioinformatics Research and Applications: 12th International Symposium, ISBRA 2016, Minsk, Belarus, June 5-8, 2016, Proceedings. Springer, 2016, 9683: 301..
  19. 徐伟, 李文根, 张毅超, 关佶红. 路网中位置不确定的二元反 kNN 查询[J].计算机应用, 2016.

2015年论文发表情况 - 关佶红(2015年12月2日)

  1. Chen, Jihong Guan*, and Shuigeng Zhou. DPNuc: Identifying Nucleosome Positions Based on the Dirichlet Process Mixture Model, IEEE Transactions on Computational Biology and Bioinformatics, DOI:10.1109/TCBB.2015.2430350, 25 May 2015. SCI论文
  2. XiaojingXie, Shuigeng Zhou*, and Jihong Guan. CoGI: Towards Compressing Genomes as an Image. IEEE Transactions on Computational Biology and Bioinformatics, DOI:10.1109/TCBB.2015.2430331, 6 May 2015. SCI论文
  3. Qiuyang Wu, Jihong Guan*, and Shuigeng Zhou. Histone Modification Patterns in Highly Differentiation Cells. Accepted by Neurocomputing, 2015.
  4. Yun Lu, YanglanGan, Jihong Guan*, and Shuigeng Zhou. An integrative analysis of nucleosome occupancy and positioning using diverse sequence dependent properties. Accepted by Neurocomputing, 2015.
  5. Hui Liu, Jianjiang Sun, Jihong Guan, Jie Zheng and Shuigeng Zhou*. Improving compound-protein interaction prediction by building up highly credible negative samples. Bioinformatics,31(12): 221-229,2015. SCI论文 ISSN 1460-2059
  6. LongwenGao, Shuigeng Zhou* and Jihong Guan. Effectively classifying short texts by structured sparse representation with dictionary filtering. Information Sciences, 323:130-142, 2015. SCI论文 ISSN 0020-0255
  7. Zhanzhan Cheng, Shuigeng Zhou*, Jihong Guan. Computationally predicting protein-RNA interactions using only positive and unlabeled examples. Journal of Bioinformatics and Computational Biology, volume 13, issue 3, 2015. SCI论文 ISSN: 0219-7200
  8. Mingyu Shao, Shuigeng Zhou* and Jihong Guan. Revisiting topological properties and models of protein–protein interaction networks from the perspective of dataset evolution. IET Systems Biology,9(4):113-119, 2015. SCI论文 ISSN: 1751-8849
  9. Yifeng Luo, Shuigeng Zhou* and Jihong Guan. LAYER: A Cost-Efficient Mechanism to Support Multi-Tenant Database as a Service in Cloud. Journal of Systems and Software, 101:86-96, 2015. SCI论文
  10. XiaojingXie, Jihong Guan and Shuigeng Zhou*. Similarity Evaluation of DNA Sequences Based on Frequent Patterns and Entropy. BMC Genomics, 16(S3):S5, 2015. SCI论文
  11. Ruichang Zhang, Zhanzhan Cheng, Jihong Guan and Shuigeng Zhou*. Exploiting Topic Modeling to Boost Metagenomic Sequences Binning. BMC Bioinformatics, 16(S5): S2, 2015. SCI论文
  12. Ling Li, Jihong Guan. Determining average path length and average trapping time on generalized dual dendrimer. International Journal of Modern Physics B, 2015, Vol. 29(12): 155007. SCI论文
  13. Ling Li, Jihong Guan, Shuigeng Zhou. Efficiency-Controllable Random Walks on a Class of Recursive Scale-Free Trees with a Deep Trap. Chinese Physics Letter, 2015, Vol. 32(3):030501. SCI论文
  14. Yichao Zhang, Guanrong Chen, Jihong Guan*, Zhongzhi Zhang, and Shuigeng Zhou, Unfavorable Individuals in Social Gaming Networks, Scientific Reports, 5: 17481, 2015. SCI论文
  15. 朱海泉,李文根,张毅超,关佶红. 基于路网的群体出行计划查询算法[J].计算机应用, 2015,35(11):3146-3150 .
  16. Weihua Zhan, Jihong Guan, Huahui Chen, Jun Niu, Guang Jin, Identifying overlapping communities in networks using evolutionary method, Physica A: Statistical Mechanics and its Applications, Volume 442, 15 January 2016, Pages 182-192, ISSN 0378-4371
  17. Yifu Huang, Shuigeng Zhou, Kai Huang, Jihong Guan. Boosting Financial Trend Prediction with Twitter Mood Based on Selective Hidden Markov Models. In: Proceedings of DASFAA 2015, pp. 435-451, Hanoi, Vietnam,April 20-23, 2015.
  18. Kai Tian, Mingyu Shao, Shuigeng Zhou, and Jihong Guan. Boosting Compound-Protein Interaction Prediction by Deep Learning. In:Proceedings of 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2015), Washington D. C., USA, Nov. 9-12, 2015.
  19. Chao Tan, Jihong Guan, Shuigeng Zhou. IKLTSA: An Incremental Kernel LTSA Method,Machine Learning and Data Mining in Pattern Recognition, Volume 9166 of the series Lecture Notes in Computer Science pp 70-83,2015.
  20. Zhong Xu, Jihong Guan. A Distributed Inverse Distance Weighted Interpolation Algorithm Based on the Cloud Computing Platform of Hadoop and Its Implementation. The 12th International Conference on Fuzzy Systems and Knowledge Discovery (FSKD'15) ,2015:2412-16 (EI收录,检索号:15704235)(增加)
  21. Yichao Zhang, Aziz-Alaoui M. A., Bertelle C., Jihong Guan. Knowledge Diffusion of Complex Networks. The IEEE International Conference on Internet of People, IOP 2015, Beijing, P.R. China, 2015,08.10-08.14(增加)

2014年-关佶红论文情况 (截至2014年12月21日)

  1. Bin Xu, Jihong Guan, "From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks," IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 11, no. 4, pp. 616-627, July-Aug. 2014, doi:10.1109/TCBB.2014.2306825
  2. Yanglan Gan, Jihong Guan, Shuigeng Zhou, Weixiong Zhang. Identifying Cis-Regulatory Elements and Modules Using Conditional Random Fields. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 11(1): 73-82 (2014)
  3. Yanglan Gan, Guobing Zou, Jihong Guan, Guangwei Xu. A Novel Wavelet-Based Approach for Predicting Nucleosome Positions Using DNA Structural Information. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 11(4): 638-647 (2014)
  4. Zhili Song, Shuigeng Zhou, Jihong Guan. A Novel Image Registration Algorithm for Remote Sensing Under Affine Transformation. IEEE Transactions on Geoscience and Remote Sensing. 52(8): 4895-4912 (2014)
  5. Ruiqi Liao, Ruichang Zhang, Jihong Guan, Shuigeng Zhou. A New Unsupervised Binning Approachfor Metagenomic Sequences Based onN-grams and Automatic Feature Weighting. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 11(1): 42-54 (2014)
  6. Huidong Chen, Jihong Guan and Shuigeng Zhou. DPNuc: Identifying Nucleosome Positions Based on the Dirichlet Process Mixture Model. IEEE/ACM Transaction on Computational Biology and Bioinformatics, 2015.
  7. Xiaojing Xie, Shuigeng Zhou, and Jihong Guan. CoGI: Towards Compressing Genomes as an Image. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2015.
  8. Yichao Zhang, M. A. Aziz-Alaoui, CyrilleBertelle, and Jihong Guan. Local Nash Equilibrium in SocialNetworks, Scientific Reports, 4: 6224 (2014), Scientific Reports. (Nature子刊)
  9. Lei Deng, Qiangfeng Cliff Zhang, Zhigang Chen, Yang Meng, Jihong Guan, Shuigeng Zhou:PredHS: a web server for predicting protein-protein interaction hot spots by using structural neighborhood properties. Nucleic Acids Research 42(Webserver-Issue): 290-295 (2014)
  10. Ling Li, Jihong Guan*, and Shuigeng Zhou. Mean first passage time for random walk on dual structure of dendrimer. Physica A. 415:463-472, 2014. (新补)
  11. Ruiqi Liao, Yifan Zhang, Jihong Guan, Shuigeng Zhou. CloudNMF: A MapReduce Implementation of Nonnegative Matrix Factorization for Large-scale Biological Datasets. Genomics, Proteomics & Bioinformatics 12(1): 48-51 (2014)
  12. Yifeng Luo, Shuigeng Zhou and Jihong Guan. LAYER: A Cost-Efficient Mechanism to Support Multi-Tenant Database as a Service in Cloud. Journal of Systems and Software, 101:86-96, 2014.(新补)
  13. Wei Xiong, Luyu Xie, Shuigeng Zhou, Jihong Guan. Active Learning for Protein Function Prediction in Protein-protein Interaction Networks. Neurocomputing, 145:44–52, 2014.
  14. Hui Liu, Ting Jin, Jihong Guan and Shuigeng Zhou. Histone modifications involve in cassette exon inclusions: a quantitative and interpretable analysis. BMC Genomics, 15:1148, 2014. DOI: 10.1186/1471-2164-15-1148
  15. Wei Xiong, Luyu Xie, Shuigeng Zhou, Hui Liu, Jihong Guan. The centrality of cancer proteins in human protein-protein interaction network: a revisit. I. J. Computational Biology and Drug Design 7(2/3): 146-156 (2014)
  16. Mingyu Shao, Yi Yang, Jihong Guan and Shuigeng Zhou. Choosing appropriate models for modeling protein-protein interaction networks: a comparison study. Briefings in Bioinformatics, 15(5):823-838, 2014.
  17. Hui Liu, Ruichang Zhang, Wei Xiong, Jihong Guan, Zhiheng Zhuang, Shuigeng Zhou*. A comparative evaluation on prediction methods of nucleosome positioning. Briefings in Bioinformatics, 15(6): 1014-1027, 2014.
  18. Qingting Wei, Jihong Guan*, Shuigeng Zhou, and Xin Wang. A New and Effective Approach to GML Documents Compression. The Computer Journal, 57(11):1723-1740, 2014.
  19. Xiaojing Xie, Jihong Guan and Shuigeng Zhou. Similarity Evaluation of DNA Sequences Based on Frequent Patterns and Entropy. BMC Genomics, 2015. 1471-2164
  20. Ruichang Zhang, Zhanzhan Cheng, Jihong Guan and Shuigeng Zhou. Exploiting Topic Modeling to Boost Metagenomic Sequences Binning. BMC Bioinformatics, 2015. 1471-2105
  21. Wengen Li, Jihong Guan, Shuigeng Zhou: Efficiently Evaluating Range-Constrained Spatial Keyword Query on Road Networks. DASFAA-SIM3,pp. 2014, 283-295.
  22. Siqiang Luo, Yifeng Luo, Shuigeng Zhou, Gao Cong, Jihong Guan. Distributed Spatial Keyword Querying on Road Networks. EDBT 2014: 235-246
  23. Yi Yang, Shuigeng Zhou, Jihong Guan. Calculating the Crossing Probability on the Square Tessellation of a Connection Game with Random Move Order: The Algorithm and Its Complexity. FAW 2014: 288-297
  24. Xiaojing Xie, Jihong Guan and Shuigeng Zhou. Similarity Analysis of DNA Sequences Based on Frequent Patterns and Entropy. LNCS 8492, page 388, Springer. June 28-30, 2014, Zhangjiajie, China.(新补)
  25. Ruichang Zhang, Zhanzhan Cheng, Jihong Guan and Shuigeng Zhou. Exploiting Topic Modeling to Boost Metagenomic Sequences Binning. LNCS 8492, page 389, Springer. June 28-30, 2014, Zhangjiajie, China.(新补)
  26. Mingyu Shao, Shuigeng Zhou, and Jihong Guan. Revisiting Topological Properties and Models of Protein-Protein Interaction Networks from the Perspective of Dataset Evolution. In: Proceedings of BIBM 2014 Workshops, IEEE, November 2-5, 2014, Belfast, UK.(新补)
  27. Weili Wang, Jihong Guan, Wengen Li, Long Zhang. GR-tree: An efficient index structure for GML. In: Proceedings of 2014 Geoinformatics, pages 1-6, 2014(新补)
  28. 谈超, 关佶红, 周水庚. 基于等角映射的多样本增量流形学习算法. 模式识别与人工智能, 2014, Vol.27(2): 127-133.(新补)
  29. 魏小敏,徐彬,关佶红.基于递归特征消除法的蛋白质能量热点预测.《山东大学学报(工学版)》.2014 Vol.44(2):12-20

2013 (SCI/SCIE-11 , EI-20 , ISTP-7)

  1. Bin Xu , Jihong Guan*. From function to interaction: a new paradigm for accurately predicting protein complexes based on protein-to-protein interaction networks. IEEE Transactions on Computational Biology and Bioinformatics, 2013.(In press)
  2. Yanglan Gan, Guobing Zou, Jihong Guan*. A novel wavelet-based approach for predicting nucleosome positions using structural feature. IEEE Transactions on Computational Biology and Bioinformatics, 2013.(In press)
  3. Zhili Song, Shuigeng Zhou, and Jihong Guan*. A novel image registration algorithm for remote sensing under affine transformation. IEEE Transactions on Geoscience and Remote Sensing, 卷: 65 期: 12 页: 1040-1049 2013.
  4. Yanglan Gan, Jihong Guan*, Shuigeng Zhou, and Weixiong Zhang. Identifying functional regulatory elements and modules based on unsupervised conditional random fields. IEEE Transactions on Computational Biology and Bioinformatics, 2013.
  5. Ruiqi Liao, Ruichang Zhang, Jihong Guan, and Shuigeng Zhou*. A New Unsupervised Binning Approach for Metagenomic Sequences Based on N-grams and Automatic Feature Weighting. IEEE Transactions on Computational Biology and Bioinformatics, 2013.
  6. Qingting Wei, Jihong Guan*, Shuigeng Zhou, and Xin Wang. A New and Effective Approach to GML Documents Compression. The Computer Journal, 2013.
  7. Lei Deng, Jihong Guan*, Xiaoming Wei, Bin Xu, Qiangfeng Cliff Zhang, and Shuigeng Zhou*. Boosting Prediction Performance of Protein-Protein Interaction Hot Spots by Using Structural Neighborhood Properties (An extended version of our RECOMB 2013 paper). To appear in Journal of Computational Biology, 2013.
  8. Shuigeng Zhou*, Ruiqi Liao, and Jihong Guan. When Cloud Computing Meets Bioinformatics: A Review. Journal of Computational Biology and Bioinformatics, 2013. (in press)
  9. Hui Liu, Ruichang Zhang, Wei Xiong, Jihong Guan, Zhiheng Zhuang, Shuigeng Zhou*. A comparative evaluation on prediction methods of nucleosome positioning. Briefings in Bioinformatics, doi: 10.1093/bib/bbt062, 2013.
  10. Wei Xiong, Hui Liu, Jihong Guan, and Shuigeng Zhou*. Protein Function Prediction by Collective Classification with Explicit and Implicit Edges in Protein-protein Interaction Networks (An extended version of our BIBM 2012 Workshop paper). BMC Bioinformatics, 14(S12), 2013.
  11. Ruiqi Liao, Yifan Zhang, Jihong Guan, and Shuigeng Zhou*. CloudNMF: a MapReduce implementation of nonnegative matrix factorization for large scale biological datasets. Genomics, Proteomics and Bioinformatics, 2013. (In press)
  12. Yanwei Xu, Jihong Guan*, Fengrong Li, Shuigeng Zhou. Scalable continual top-k keyword search in relational databases. Data and Knowledge Engineering, 86: 206-223, 2013.
  13. Hui Liu, Shuigeng Zhou, and Jihong Guan. Identifying Mammalian MicroRNA Targets Based on Supervised Distance Metric Learning. IEEE Journal of Biomedical and Health Informatics (previously IEEE Transactions on Information Technology in Biomedicine),17(2):427-435, March 2013.
  14. Yichao Zhang, Shi Zhou, Zhongzhi Zhang, Jihong Guan, Shuigeng Zhou. Rumor Evolution in Social Networks, Physical Review E, 87, 032133, March 15, 2013.
  15. Mingyu Shao, Yi Yang, Jihong Guan and Shuigeng Zhou*. Choosing appropriate models for modeling protein-protein interaction networks: a comparison study. Briefings in Bioinformatics, doi: 10.1093/bib/bbt014, March 19, 2013.
  16. Yifeng Luo, Shuigeng Zhou*, and Jihong Guan. A RAMCloud Storage System Based on HDFS: Architecture, Implementation and Evaluation. Journal of Systems and Software, 86(3): 744-750, 2013
  17. Lei Deng, Jihong Guan, Xiaoming Wei, Yuan Yi, and Shuigeng Zhou. Boosting Prediction Performance of Protein-Protein Interaction Hot Spots by Using Structural Neighborhood Properties. In: Proceedings of RECOMB 2013, pp. 333-344, Beijing, China, April 7-10, 2013.
  18. Wei Xiong, Luyu Xie, Jihong Guan, and Shuigeng Zhou. Active Learning for Protein Function Prediction in Protein-Protein Interaction Networks. In: Proceedings of 8th IAPR International Conference on Pattern Recognition in Bioinformatics (PRIB 2013), pp. 172-183, June 19-20, Nice, France.
  19. Xin Cao, Lisi Chen, Gao Cong, Jihong Guan, Nhan-Tue Phan, Xiaokui Xiao: KORS: Keyword-aware Optimal Route Search System. ICDE 2013: 1340-1343
  20. Chao Tan, Chao Chen, Jihong Guan. A Nonlinear Dimension Reduction Method with Both Distance and Neighborhood Preservation. Knowledge Science, Engineering and Management Lecture Notes in Computer Science, Vol. 8041, 2013, pp 48-63
  21. Chao Tan, Jihong Guan, Incremental Manifold Learning Based on Iterative Decomposition. International Journal of Data Warehousing and Mining.
  22. Qingting Wei, Jihong Guan. A spatial proximity based compression method for GML documents. LNCS,Vol.7923, WAIM 2013: 465-471
  23. 魏小敏,徐彬,关佶红(通信作者). 基于递归特征消除法的蛋白质能量热点预测. 山东大学学报(工学版)
  24. 魏小敏.特征选择在蛋白质能量热点预测中的应用. 电脑知识与技术,2013,9(4):846-848
  25. 谈超, 关佶红, 周水庚. 基于等角映射的多样本增量流形学习算法. 模式识别与人工智能
  26. 郝泽东,余凇凇,关佶红. 基于主动学习的高光谱图像分类方法.计算机应用


2012 (SCI/SCIE-13 , EI-17 , ISTP-3)

  1. *Zhang, Yichao, Zhou, Shi, Zhang, Zhongzhi, Guan, Jihong, Zhou, Shuigeng, Chen, Guanrong. Traffic Fluctuations on Weighted Networks. IEEE Circuits and Systems Magazine, 12(1), pp 33-44, February 2012 (Feature article).
  2. Geng, Xin, *Guan, Jihong, Dong, Qiwen, Zhou, Shuigeng. An improved Genetic Algorithm for statistical potential function design and protein structure prediction. International Journal of Data Mining and Bioinformatics, 6(2), pp 162-177, 2012.
  3. Gan, Yanglan, *Guan, Jihong, Zhou, Shuigeng, Zhang, Weixiong. Structural features based genome-wide characterization and prediction of nucleosome organization. BMC Bioinformatics, 13卷:49, 2012/3/26.
  4. Gan, Yanglan, *Guan, Jihong, Zhou, Shuigeng. A comparison study on feature selection of DNA structural properties for promoter prediction. BMC Bioinformatics, 13卷:4, 2012/1/7.
  5. Bin Xu, Xiaomin Wei, Lei Deng, Jihong Guan*, Shuigeng Zhou*. A Semi-supervised Boosting SVM for Predicting Hot Spots at Protein-protein Interfaces. BMC Systems Biology, 6(S2), 2012.
  6. Jiandong Ding, Shuigeng Zhou* and Jihong Guan*. Finding MicroRNA Targets in Plants: Current Status and Perspectives. Genomics, Protemics and Bioinformatics, 10: 264-275, 2012.
  7. Wang, Junjie, *Zhou, Shuigeng, Guan, Jihong*. Detecting potential collusive cliques in futures markets based on trading behaviors from real data. Neurocomputing, 92卷, pp 44-53, 2012/9/1.
  8. Linxia Wan, Jiandong Ding, Ting Jin, Jihong Guan* and Shuigeng Zhou*. Automatically clustering large-scale miRNA sequences: methods and experiments. BMC Genomics, 13(S8), 2012.
  9. Hui Liu, Ting Jin, Ruiqi Liao, Linxia Wan, Bin Xu, Shuigeng Zhou* and Jihong Guan*. miRFANs: an integrated database for Arabidopsis thaliana microRNA function annotations. BMC Plant Biology, 12:68, 2012.
  10. Yifeng Luo, Shuigeng Zhou, and Jihong Guan. A RAMCloud Storage System Based on HDFS: Architecture, Implementation and Evaluation. Journal of Systems and Software, 2012.
  11. Xu, Ming, *Zhou, Shuigeng, Guan, Jihong. Enhancing Routing Robustness of Unstructured Peer-to-Peer Networks Using Mobile Agents. Journal of Network and Systems Management, 20(3), pp 309-352, 2012/9.
  12. Ding, Jiandong, Li, Danqing, Ohler, Uwe, *Guan, Jihong, *Zhou, Shuigeng. Genome-wide search for miRNA-target interactions in Arabidopsis thaliana with an integrated approach. BMC Genomics, 13卷, 2012/6/11.
  13. Yanwei Xu, Yoshiharu Ishikawa, Jihong Guan: Efficient Continual Top-k Keyword Search in Relational Databases. Journal of Information Processing, 20(1): 114-127, 2012.
  14. Jianyuan Li, Jihong Guan. Learning with joint sparse representation. International Journal of Advancements in Computing technology. EI. 2012.
  15. Siqiang Luo, Yifeng Luo, Shuigeng Zhou, Gao Cong, Jihong Guan. DISKs: A System for Distributed Spatial Group Keyword Search on Road Networks. VLDB, 5(12): 1966-1969, 2012.
  16. Yanwei Xu, Jihong Guan, Yoshiharu Ishikawa. Scalable Top-k Keyword Search in Relational Databases. Processing of DASFAA 2012, pages 65-80, 2012.
  17. Chao Tan, Jihong Guan. A Feature Space Alignment Learning Algorithm. 12th Pacific Rim International Conference on Artificial Intelligence (PRICAI 2012). EI. 2012.
  18. Chao Tan, Jihong Guan. A New Manifold Learning Algorithm Based on Incremental Spectral Decomposition. The 8th International Conference on Advanced Data Mining and Applications (ADMA), 2012.
  19. Jianyuan Li, Jihong Guan. Constrained Spectral Clustering using Absorbing Markov Chains. The 8th International Conference on Advanced Data Mining and Applications (ADMA), 2012.
  20. Mingyu Shao, Yi Yang, Jihong Guan, and Shuigeng Zhou. A Comparison Study on Protein-protein Interaction Network Models. In: Proceedings of IEEE BIBM 2012, pages 491-494, Philadelphia, USA, October 2012.
  21. Yuan Yi, Jihong Guan, Shuigeng Zhou, Effective Clustering of MicroRNA Sequences by N-grams and Feature Weighting. In: Proceedings of 2012 IEEE International Conference on Systems Biology (ISB’12), Xi'an, China, August 18-20, 2012.
  22. Wei Xiong, Hui Liu, Jihong Guan, Shuigeng. Effectively Predicting Protein Functions by Collective Classification. In: Proc. of IEEE International Conference on Bioinformatics and Biomedicine 2012 Workshops, 634-639, Philadelphia, USA, October 2012.
  23. 谈超, 关佶红, 周水庚. 增量与演化流形学习综述. 智能系统学报, 2012.
  24. 王发标, 关佶红, 朱付保. 空间坐标分离的GML文档存储与查询. 计算机工程与应用, 02期, pp 151-155, 2012. 期刊论文.
  25. 范帆, 关佶红. 工程图纸字符串及标注信息提取. 计算机工程与应用, 07期, pp 161-164, 2012. 期刊论文.
  26. 刘辉, 壮子恒, 关佶红, 周水庚. 核小体定位的转录调控功能研究进展. Progress In Biochemistry and Biophysics, 09期, pp 843-852, 2012. 期刊论文, 0.2140(2007)
  27. 万琳霞, 丁建栋, 关佶红. 计算方法预测microRNA研究进展. 计算机应用与软件, 05期, pp 159-162+194, 2012. 期刊论文.
  28. 郁抒思, 周水庚, 关佶红. 软件工程数据挖掘研究进展. 计算机科学与探索, 01期, pp 1-31, 2012. 期刊论文.
  29. 陆雷岳, 关佶红. 基于GML的多源空间数据集成模式研究. 电脑知识与技术, 13期, pp 2959-2961, 2012. 期刊论文.
  30. 陈辉, 杨湘浩, 关佶红. 广电BOSS 的架构和关键技术分析. 计算机科学期刊. 2012

2011 (SCI/SCIE-12 , EI-14 , ISTP-1)

  1. Lei Deng, Jihong Guan, Qiwen Dong and Shuigeng Zhou. SemiHS: An Iterative Semi-supervised Approach for Predicting Protein-protein Interaction Hot Spots, Protein & Peptide letters, 18(9): 896-905, September 2011.
  2. Qiangfeng Cliff Zhang, Lei Deng, Markus Fisher, Jihong Guan, Barry Honig, and Donald Petrey. PredUs: a web server for predicting protein interfaces using structural neighbors. Nucleic Acids Res., 39(Web Server issue): W283–W287, July 1, 2011.
  3. Xiangwei Chu, Zhongzhi Zhang, Jihong Guan, Shuigeng Zhou. Epidemic Spreading with Nonlinear Infectivity in Weighted Scale-free Networks. Physica A: Statistical Mechanics and its Applications, 2011, 390(3):471-481
  4. Yichao Zhang, Zhongzhi Zhang, Jihong Guan, Shuigeng Zhou. Diffusion-Annihilation Processes in Weighted Scale-free Networks with an Identical Degree Sequence. Journal of Statistical Mechanics: Theory and Experiment. 2011, 10: P10001
  5. Weihua Zhan, Zhongzhi Zhang, Jihong Guan, Shuigeng Zhou. Evolutionary method for finding communities in bipartite networks. Phys. Rev. E 83, 066120 (2011)
  6. Xin Geng, Jihong Guan, Qiwen Dong, Shuigeng Zhou, An Improved Genetic Algorithm for Statistical Potential Function Design and Protein Structure Prediction. International Journal of Data Mining and Bioinformatics, 2011 (in press)
  7. Jiandong Ding, Shuigeng Zhou and Jihong Guan. miRFam: an effective automatic miRNA classification method based on n-grams and a multiclass SVM. BMC Bioinformatics, 12:216, 2011. doi:10.1186/1471-2105-12-216.
  8. Junjie Wang, Shuigeng Zhou, Jihong Guan. Characteristics of Real Futures Trading Networks. Physica A:Statisctical Mechanics and its Applications, 2011, 390(2):398-409.
  9. Ming Xu, Shuigeng Zhou, Jihong Guan. A new and effective hierarchical overlay structure for Peer-to-Peer networks. Computer Communications, 2011, 34(7): 862-874.
  10. Ming Xu, Shuigeng Zhou, Jihong Guan. Enhancing Routing Robustness of Unstructured Peer-to-Peer Networks Using Mobile Agents. Journal of Network and Systems Management. 2011
  11. Boliang Zhang, Shuigeng Zhou, Jihong Guan. Adapting Skyline Computation to the MapReduce Framework: Algorithms and Experiments. Database Systems for Adanced Applications, Lecture Notes in Computer Science, 2011, Volume 6637/2011, 403-414, DOI: 10.1007/978-3-642-20244-5_39
  12. Yifeng Luo, Jihong Guan, Shuigeng Zhou. Towards Efficient Subgraph Search in Cloud Computing Environments. Database Systems for Adanced Applications, Lecture Notes in Computer Science, 2011, Volume 6637/2011, 2-13, DOI: 10.1007/978-3-642-20244-5_2
  13. Weili Wang, Jihong Guan, Long Zhang, Zhiping Qian. A Self-index GML Storage Approach based on Element Coding. In Proc. Of Geoinformatics 2011
  14. Weihua Zhan, Jihong Guan, Zhongzhi Zhang. A new method for extracting the hierarchical organization of networks. International Journal of Information Technology and Decision Making, 2011(in press)
  15. Jianyuan Li, Jihong Guan. Learning with Joint Sparse Representation. International Journal of Advancements on Computing technology , 2011(in press)
  16. Yanwei Xu, Yoshiharu Ishikawa, Jihong Guan. Efficient Continuous Top- k Keyword Search in Relational Databases. Journal of Information Processing pp:755-767, 2011.
  17. Yanglan Gan, Jihong Guan, Weixiong Zhang, Shuigeng Zhou. A Comparison Study on Feature Selection of DNA Structural Properties for Promoter Prediction. BMC Bioinformatics(in press)
  18. 魏勍颋, 关佶红, 周水庚. 一种基于文档模式的GML压缩方法.《计算机研究与发展》.2011, 48(9):1704-1713
  19. 李建元,周脚根,关佶红,周水庚. 谱图聚类算法研究进展,《智能系统学报》, Vol.6, No.5:pp:405-414,2011.
  20. 于一男, 关佶红, 周水庚, 朱付保. GSPress: 一个GML流压缩器. 《小型微型计算机系统》,2011,32(3):397-401
  21. 詹卫华,关佶红,章忠志. 复杂网络研究进展: 模型与应用. 《小型微型计算机系统》, 2011, 32(2): 193-202.
  22. 许红儒, 朱付保, 关佶红. 一种基于LRIR的语义Web服务发现方法. 《小型微型计算机系统》
  23. 熊伟,周水庚,关佶红. 网络数据分类研究进展. 《模式识别与人工智能》,2011,4:527-537
  24. 张波良, 周水庚, 关佶红. MapReduce框架下的Skyline计算. 《计算机科学与探索》, 2011, 5(5): 385-397. Journal of Frontiers of Computer Science and Technology. 1673-9418/2011/05(05)-0385-13, DOI: 10.3778/j.issn.1673-9418.2011.05.001
  25. 蒋凯,关佶红. 基于重启随机游走模型的图上关键字搜索. 《计算机工程与应用》,2011, 37(3): 42-43+46
  26. 邓定雄,关佶红. 基于SPB树的公路网络最短路径查询. 《计算机工程》, 2011,37(22):56-58
  27. 黄小亮,郁抒思,关佶红. 基于LDA主题模型的软件缺陷分派方法. 《计算机工程》,2011,37(21):46-48
  28. 毛雪, 关佶红. Web服务发现技术研究. 《计算机技术与发展》,2011, 21(3): 10-14
  29. 王发标, 关佶红, 朱付保. 基于模式映射的GML文档存储[J].《计算机应用与软件》,2011,28(5): 12 - 16,44.
  30. 王发标, 关佶红, 朱付保. 空间坐标分离的GML文档存储与查询. 《计算机工程与应用》.
  31. 张龙, 关佶红, 王炜立, 钱志萍. GNETS:一种新的GML数据存储和查询机制. 《微电子学与计算机》, 2011, 28(8):22-25
  32. 钱志萍, 关佶红, 王炜立, 张龙. 支持大数据量GML到SVG转换的XSLT优化处理器. 《微电子学与计算机》, 2011, 28(9): 169-172.
  33. 杨寅, 关佶红. 一个基于国密SM1算法的CPU卡多应用解决方案.


2010 (SCI/SCIE-15 , EI-20 , ISTP-0)

  1. Xin Geng, Jihong Guan, Qiwen Dong, Shuigeng Zhou, An Improved Genetic Algorithm for Statistical Potential Function Design and Protein Structure Prediction. International Journal of Data Mining and Bioinformatics, 2010. (in press)
  2. Xiangwei Chu, Zhongzhi Zhang, Jihong Guan, Shuigeng Zhou. Epidemic spreading with nonlinear infectivity in weighted scale-free networks. Physica A, 2010, 390: 471-481.
  3. Xiangwei Chu, Zhongzhi Zhang, Jihong Guan, Shuigeng Zhou, Li Mo. Different Behaviors of epidemic spreading in scale-free networks with identical degree sequence. Journal of Physics A: Mathematical and Theoretical. 2010, 43:065001.
  4. Yichao Zhang, Zhongzhi Zhang, Shuigeng Zhou, Jihong Guan. Deterministic weighted scale-free small-world networks. Physica A, 2010, 389(16): 3316-3324 SCI他引2次
  5. Zhang Yichao, Zhang Zhongzhi, Guan Jihong, Zhou Shuigeng. An analytic derivation of clustering coefficients for weighted networks. Journal of Statistical Mechanics: Theory and Experiment, 2010, P03013.
  6. Ming Xu, Shuigeng Zhou, Jihong Guan, Xiaohua Hu. A Path-traceable Query Routing Mechanism for Search in Unstructured Peer-to-Peer Networks. Journal of Network and Computer Applications. Elsevier, 33(2):115-127, 2010. doi:10.1016/j.jnca.2009.11.003
  7. Shuigeng Zhou, Ming Xu, Jihong Guan. LESSON: A System for Lecture Notes Searching and Sharing over Internet. Journal of Systems and Software, 83(10): 1851-1863, 2010.
  8. Ming Xu, Shuigeng Zhou, Jihong Guan. A new and effective hierarchical overlay structure for Peer-to-Peer networks. Computer Communications, 2010. (in press)
  9. Hui Liu, Shuigeng Zhou, Jihong Guan. Detecting Microarray Data Supported MicroRNA-mRNA Interactions. International Journal of Data Mining and Bioinformatics, 2010, 4(6): 639-655.
  10. Jiandong Ding, Shuigeng Zhou, Jihong Guan. MiRenSVM: towards better prediction of microRNA precursors using an ensemble SVM classifier with multi-loop features. BMC Bioinformatics, 2010. (in press)
  11. Junjie Wang, Shuigeng Zhou, Jihong Guan. Characteristics of Real Futures Trading Networks. Physica A, 2010. (in press)
  12. Qiwen Dong, Shuigeng Zhou, Lei Deng, Jihong Guan. Gene ontology-based protein function prediction by using sequence composition information. Protein & Peptide letters, 17(6): 789-795, 2010.
  13. Zhang Zhongzhi, Qi Yi, Zhou Shuigeng, Shuyang Gao, Guan Jihong. Explicit determination of mean first-passage time for random walks on deterministic uniform recursive trees. Physical Review E, 2010, 81:016114.
  14. Zhongzhi Zhang, Bin Wu, Hongjuan Zhang, Shuigeng Zhou, Jihong Guan, Zhigang Wang. Determining global mean-first-passage time of random walks on Vicsek fractals using eigenvalues of Laplacian matrices. Physical Review E, 2010, 81: 031118.
  15. Zhongzhi Zhang, Shuyang Gao, Lichao Chen, Shuigeng Zhou, Hongjuan Zhang, Jihong Guan. Mapping Koch curves into scale-free small-world networks. Journal of Physics A: Mathematical and Theoretical, 2010, 43, 395101.
  16. Xin Geng, Jihong Guan, Qiwen Dong, Shuigeng Zhou. Protein backbone dihedral angles prediction based on probabilistic models. The 4th International Conference on Bioinformatics and Biomedical Engineering. In: Proc. of The 4th International Conference on Bioinformatics and Biomedical Engineering (iCBBE 2010), pp.1-4, IEEE CS, June 18-20, 2010, Chengdu, China.
  17. Qingting Wei, Jihong Guan. A GML compression approach based on on-line semantic clustering. In: Proc. Of Geoinformatics 2010, pp.1-7.
  18. Ming Xu, Shuigeng Zhou, Jihong Guan. Building Resilient Unstructured Peer-to-Peer Networks Using Mobile Agents. In: Proc. Of SKG 2010, Nov. 1-3, 2010, Ningbo, China.
  19. Yanwei Xu, Yoshiharu Ishikawa, Jihong Guan. Efficient Continuous Top-k Keyword Search in Ralational Databases. In: Proc. Of WAIM 2010, pp.755-767.
  20. Hongru Xu, Jihong Guan, Fubao Zhu. LRIR: A Hybrid Semantic Web Services Matching Approach. In: Proc. Of 2010 3rd International Conference on Information Sciences and Interaction Sceinces, pp.335-339, Chengdu, China, June 2010.
  21. Fubao Zhu, Shuigeng Zhou, Jihong Guan. Querying GML Documents: An Xquery based Approach. In: Proc. Of 2010 International Conference on Computer and Communication Technologies in Agriculture Engineering (CCTAE).
  22. 魏勍颋, 关佶红, 周水庚. 一种基于文档模式的GML压缩方法.《计算机研究与发展》.
  23. 严华云, 关佶红, 詹卫华, 蒋云良. 非对称双向Base-k Chord. 《电信科学》, 2010年第10期
  24. 严华云, 关佶红. BloomFilter研究进展. 《电信科学》, 2010年第2期,31-36.
  25. 严华云, 关佶红. 基于BloomFilter的安全P2P共享模型. 《计算机科学》, 2010年第37卷第5期, 72-76.
  26. 严华云,关佶红. 基于Bloom滤波器的对等网多关键字检索. 《计算机应用》, 2010, 30(9): 2335-2338.
  27. 毛雪, 关佶红, 朱付保. 基于语义向量模型的Web服务匹配方法. 《计算机应用研究》, 2010, 27(10): 3754-3757.
  28. 毛雪, 关佶红. Web服务发现技术研究. 《计算机技术与发展》,2011(3):
  29. 关佶红, 许红儒, 周水庚. Web服务搜索技术综述. 《计算机科学与探索》, 2010年第5期,第4卷,PP.385-400
  30. 许红儒, 朱付保, 关佶红. 一种基于LRIR的语义Web服务发现方法. 《小型微型计算机系统》
  31. 王发标, 关佶红, 朱付保. 空间坐标分离的GML文档存储与查询. 《计算机工程与应用》.
  32. 王发标, 关佶红, 朱付保. 基于模式映射的GML文档存储. 《计算机应用与软件》.
  33. 于一男, 关佶红, 周水庚, 朱付保. GSPress: 一个GML流压缩器. 《小型微型计算机系统》
  34. 蒋凯,关佶红. 基于重启随机游走模型的图上关键字搜索. 《计算机工程与应用》


2009 (SCI/SCIE-22 , EI-23 , ISTP-5)

  1. Yanglan Gan, Jihong Guan, and Shuigeng Zhou. A pattern-based nearest neighbor search approach for promoter prediction using DNA structural profiles. Bioinformatics, 25 (16): 2006-2012, 2009
  2. Qiwen Dong, Shuigeng Zhou, and Jihong Guan. A new taxonomy-based protein fold recognition approach based on auto-cross covariance transformation. Bioinformatics, 25(20):2655-2662, 2009.
  3. Lei Deng, Jihong Guan, Qiwen Dong and Shuigeng Zhou. Prediction of protein-protein interaction sites using an ensemble method. BMC Bioinformatics 2009, 10:426, 16 Dec, 2009. http://www.biomedcentral.com/1471-2105/10/426.
  4. Xuejun Liu, Jihong Guan, and Ping Hu, Mining Frequent Closed Itemsets from Landmark Windows over Online Data Streams. Computer and Mathematics with Applications, 57 (2009) 927_936.
  5. Xin Lu and Jihong Guan, A New Approach to Building Histogram for Selectivity Estimation in Query Processing Optimization. Computer and Mathematics with Applications, 57 (2009) 1037_1047.
  6. Ming Xu, Shuigeng Zhou, Jihong Guan, Xiaohua Hu. A Path-traceable Query Routing Mechanism for Search in Unstructured Peer-to-Peer Networks. Journal of Network and Computer Applications. Elsevier, 2009. doi:10.1016/j.jnca.2009.11.003
  7. Zhongzhi Zhang, Shuigeng Zhou, Tao Zou, Lichao Chen, Jihong Guan. Different thresholds of bond percolation in scale-free networks with identical degree sequence. Physical Review E, 79,031110,2009.
  8. Zhongzhi Zhang, Yi Qi, Shuigeng Zhou, Wenlei Xie and Jihong Guan. Exact solution for mean first-passage time on a pseudofractal scale-free web, Physical Review E, 79, 021127, 2009.
  9. Zhongzhi Zhang, Shuigeng Zhou, Wenlei Xie, Lichao Chen, Yuan Lin, and Jihong Guan. Standard random walks and trapping on the Koch network with scale-free behavior and small-world effect, Physical Review E, 2009, 79:061113.
  10. Zhang Zhongzhi, Qi Yi, Zhou Shuigeng, Lin Yuan, and Guan Jihong. Recursive solutions for Laplacian spectra and eigenvectors of a class of growing treelike networks, Physical Review E, 2009, 80:016104.
  11. Zhang Zhongzhi, Guan Jihong, Xie Weilen, Qi Yi, and Zhou Shuigeng. Random walks on the Apollonian network with a single trap. EPL (Europhysics Letters), 2009, 86: 10006.
  12. Zhongzhi Zhang, Wenlei Xie, Shuigeng Zhou, Shuyang Gao and Jihong Guan. Anomalous behavior of trapping on a fractal scale-free network. EPL, 88:10001, 2009.
  13. Zhongzhi Zhang, Jihong Guan, Bailu Ding, Lichao Chen, and Shuigeng Zhou. Contact graphs of disk packings as a model of spatial planar networks. New Journal of Physics, 2009, 11:083007.
  14. Zhongzhi Zhang, Yuan Lin, Shuigeng Zhou, Bin Wu and Jihong Guan. Mean first-passage time for random walks on the T-graph. New Journal of Physics, 2009, 11:103043
  15. Zhongzhi Zhang, Yichao Zhang, Shuigeng Zhou, Ming Yin and Jihong Guan. Influences of Degree Inhomogeneity on Average Path Length and Random Walks in Disassortative Scale-free Networks, Journal of Mathematical Physics, 50, 033514, 2009.
  16. Qi Yi, Zhang Zhongzhi, Ding Bailu, Zhou Shuigeng, and Guan Jihong. Structural and spectral properties of a family of deterministic recursive trees: Rigorous solutions. Journal of Physics A: Mathematical and Theoretical, 2009, 42: 165103.
  17. Jihong Guan, Yuewen Wu, Zhongzhi Zhang and Shuigeng Zhou, A unified model for Sierpinski networks with scale-free scaling and small-world effect, Physica A, 388(12): 2571-2578, 2009.
  18. Xuejun Liu, Jihong Guan, Guangwei Bai, Haiming Lu, SWER:small world-based efficient routing for wireless sensor networks with mobile sinks, Frontiers of Computer Science in China, 3(3) :427-434, 2009.
  19. Zhang Zhongzhi, Fang Lujun, Zhou Shuigeng, Guan Jihong. Effects of accelerating growth on the evolution of weighted complex networks. Physica A, 388(2-3): 225-232, 2009.
  20. Chu Xiangwei, Guan Jihong, Zhang Zhongzhi, and Zhou Shuigeng. Epidemic spreading in weighted scale-free networks with community structure. Journal of Statistical Mechanics: Theory and Experiment, 2009, P07043.
  21. Zhongzhi Zhang, Lichao Chen, Lujun Fang, Shuigeng Zhou, Yichao Zhang and Jihong Guan. The rigorous solution for the average distance of a Sierpinski network. Journal of Statistical Mechanics: Theory and Experiment, P02034, 2009.
  22. Zhang Zhongzhi, Lin Yuan, Gao Shuyang, Zhou Shuigeng, Guan Jihong. Average distance in a hierarchical scale-free network: an exact solution. Journal of Statistical Mechanics: Theory and Experiment, P10022, 2009.
  23. Jihong Guan, Yanglan Gan, and Hao Wang. Discovering pattern-based subspace clusters by pattern tree. Knowledge-Based Systems, 22(8): 569-579, 2009.
  24. Qiwen Dong, Xin Geng, Shuigeng Zhou and Jihong Guan. Empirical probability function derived from dihedral angles for protein structure prediction. In: Proceedings of IEEE BIBE 2009, pp. 146-152, June 2009.
  25. Qiwen Dong, Shuigeng Zhou, Jihong Guan. Improved prediction of the contact numbers of residues in proteins from primary sequences, In: Proceedings of IJCBS’09, pp.251-254, Aug. 2009.
  26. Jian Yu, Jihong Guan, Jianliang Xu, Shuigeng Zhou, Towards Keyword Search over Relational Databases in DHT Networks, to appear in: Proceedings of ICPADS 2009, pp.448-455, Dec. 2009.
  27. Yanwei Xu, Yoshiharu Ishikawa and Jihong Guan. Effective Top-k Keyword Search in Relational Databases Considering Query Semantics. Lecture Notes in Computer Science, Volume 5731/2009, Advances in Web and Network Technologies, and Information Management, 172-184, Springer.
  28. 孔旭,关佶红,以声谱图相似度为度量的波形音乐检索,《计算机工程与应用》,45 (13): 136-141,2009。
  29. 朱琳,关佶红,周水庚,基于结构化对等网络的skyline计算,《计算机应用与软件》,26(4):5-7+30, 2009.
  30. 俞剑,关佶红,一种基于P2P的关键词搜索新方法,《微电子学与计算机》, 2009年第26卷第08期
  31. 黄博,蔚赵春,关佶红. 无线传感器网路中基于值的kNN查询处理. 《微电子学与计算机》, 2009年第26卷第08期
  32. 蒋勤良,蔚赵春,关佶红. 一个基于P2P的文本共享与检索系统.《计算机应用与软件》, 2009, 26(8): 1 – 4.
  33. 陶余会,周水庚,关佶红. 一种新的基于文本单元关联网络的自动文摘方法. 《模式识别与人工智能》, 22(3): 440-444, 2009.

2008 (SCI/SCIE-13 , EI-17 , ISTP-4)

  1. Jihong Guan, Shuigeng Zhou, and Yan Chen. An Effective GML Documents Compressor. IEICE Transactions on Information and Systems, Vol.E91-D, No.7, pp.1982-1990, Jul.2008.
  2. Xuejun Liu, Jihong Guan, and Ping Hu, Mining Frequent Closed Itemsets from Landmark Windows over Online Data Streams. Computer and Mathematics with Applications, 2008 Vol.57(6), pp.927-936..
  3. Xin Lu and Jihong Guan, A New Approach to Building Histogram for Selectivity Estimation in Query Processing Optimization. Computer and Mathematics with Applications, 2008 Vol.57(6), pp.1037-1047, 2009.
  4. Shuigeng Zhou, Guobiao Hu, Zhongzhi Zhang, and Jihong Guan. An empirical study of Chinese language networks. Physica A, 387: 3039–3047, 2008.
  5. Guobiao Hu, Shuigeng Zhou, Jihong Guan, and Xiaohua Hu, Towards Effective Document Clustering: A Constrained K-means Based Approach. Information Processing and Management, 44(4):1397–1409, 2008.
  6. Zhang Zhongzhi, Zhou Shuigeng, Chen Lichao, Yin Ming, Guan Jihong. The exact solution of mean geodesic distance for Vicsek fractals. Journal of Physics A: Mathematical and Theoretical, 2008, 41:485102.
  7. Zhongzhi Zhang, Lichao Chen, Shuigeng Zhou, Lujun Fang, Jihong Guan, and Tao Zou. Exact analytical solution of average path length for Apollonian networks. Physical Review E, 77, 017102, 2008.
  8. Jihong Guan. Zhongzhi Zhang, Shuigeng Zhou, Zhan Su, Tao Zou, andRandom Sierpinski network with scale-free small world and modular structure. European Physical Journal B 65, 141–147, 2008.
  9. Zhongzhi Zhang, Shuigeng Zhou, Lichao Chen, and Jihong Guan. Transition from fractal to non-fractal scalings in growing scale-free networks. European Physical Journal B 64, 277–283 , 2008.
  10. Zhongzhi Zhang, Shuigeng Zhou, Yi Qi, and Jihong Guan. Topologies and Laplacian spectra of a deterministic uniform recursive tree. European Physical Journal B 63, 507–513, 2008.
  11. Zhongzhi Zhang, Shuigeng Zhou, Shanghong Zhao, and Jihong Guan. Degree and component size distributions in the generalized uniform recursive tree. J. Phys. A: Math. Theor. 41 (2008) 185101.
  12. Zhang Zhongzhi, Fang Lujun, Zhou Shuigeng, Guan Jihong. Effects of accelerating growth on the evolution of weighted complex networks. Physica A, 388: 225-232, 2009.
  13. Zhongzhi Zhang, Shuigeng Zhou, and Jihong Guan. Scale-free Networks by Clique Evolution. Dynamics of Continuous, Discrete and Impulsive Systems (B). (in press)
  14. Yuhui Tao, Shuigeng Zhou, Wai Lam, and Jihong Guan. Towards more effective text summarization based on textual association networks. In Proc. of SKG 2008, IEEE CS, 2008, Beijing, China.
  15. Hui Chen, Fubao Zhu, Jihong Guan, Shuigeng Zhou. Gstruct: a system for extracting schemas from GML documents. In Proc. of of International Conference on Geoinformatics 2008, SPIE, Vol. 7143 714309-(1-11), 2008.
  16. Yuzhen Li, Takashi Imaizumi, Jihong Guan, Shiro Sakata, and Hiroo Sekiya. Spatial Data Compression Techniques for GML. In Proc. of FCST 2008, IEEE Computer Society, pp.79-84,2008.
  17. 蔚赵春,周水庚, 关佶红, 无线传感器网络中数据存储与访问研究进展, 电子学报, 36(4): 2001-2010,
  18. 陈慧, 朱付保, 关佶红, 周水庚. GML查询处理器的设计与实现. 计算机研究与发展, 45(suppl.) 396-401, Oct., 2008. ISSN 1000-1239.
  19. 朱琳, 关佶红, 周水庚. Skyline计算研究综述.计算机工程与应用, 2008, 44 (6): 160-165. ISSN 1002-8331, CN 11-2127/TP.
  20. 朱付保, 关佶红, 周水庚. 基于区间编码的GML索引与查询.计算机科学, 35(3): 65-67, 2008. ISSN 1002-137X; CN—1075/TP.
  21. 陶余会,周水庚,关佶红. 一种新的基于词汇衔接的自动文摘方法. 2008年中国机器学期会议文集,2008年10月.


2007 (SCI/SCIE-9 , EI-18 , ISTP-9)

  1. Jihong Guan, Jiaogen Zhou, and Shuigeng Zhou. MAGGIS: A Mobile-Agent and GML Based Distributed Geographic Information System. International Journal of Web Information Systems (IJWIS), Vol.2, No.3-4, pp.143-153, Emerald Group Publishing Ltd., 2007
  2. Jihong Guan, Shuigeng Zhou, GPress: Towards Effective GML Documents Compresssion. In: Proceedings of ICDE 2007, pp. 1473-1474, IEEE CS, 2007.
  3. Jihong Guan, Shuigeng Zhou, Jiaogen Zhou. Building Web Services in P2P Networks. In Encyclopedia of Mobile Computing and Commerce, vol.2, 2007.
  4. Jihong Guan, Shuigeng Zhou, Jiaogen Zhou, Fubao Zhu. WS-LBS: Providing Location-based Services under Web Services Framework. In Encyclopedia of Mobile Computing and Commerce, vol.2, 2007.
  5. Jihong Guan, Shuigeng Zhou, Jiaogen Zhou, Fubao Zhu. Building Distributed Web GIS: A Mobile-Agent Based Approach. In Encyclopedia of Mobile Computing and Commerce, vol.2, 2007.
  6. Yichao Zhang, Zhaochun Zhang and Jihong Guan. An empirical study of an agglomeration network. J. Phys. A: Math. Theor. 40: 12365-12375, 2007 (doi:10.1088/1751-8113/40/41/007)
  7. Zhou Shuigeng, Hu Guobiao, Zhang Zhongzhi, Guan Jihong. An empirical study of Chinese language networks. Physica A
  8. Zhongzhi Zhang, Lichao Chen, Shuigeng Zhou, Lujun Fang, Jihong Guan, and Tao Zou. Exact analytical solution of average path length for Apollonian networks. Accepted by Physical Review E, 2007.
  9. Zhongzhi Zhang, Shuigeng Zhou, Tao Zou, Lichao Chen, and Jihong Guan. Incompatibility networks as models of scale-free small-world graphs. European Physical Journal B. 60, 259-264–264, 2007.
  10. Zhang Zhongzhi, Zhou Shuigeng, Fang Lujun, Guan Jihong, Zhang Yichao. Maximal planar scale-free Sierpinski networks with small-world effect and power-law strength-degree correlation. Europhysics Letters, 2007, 79: 38007.
  11. Zhongzhi Zhang, Lili Rong, Bing Wang, Shuigeng Zhou, Jihong Guan. Local-world evolving networks with tunable clustering. Physica A, 380: 639–650, 2007.
  12. Zhang Zhongzhi, Zhou Shuigeng, Chen Lichao, Guan Jihong, Fang Lujun, Zhang Yichao. Recursive weighted treelike networks. European Physical Journal B , 59: 99–107, 2007.
  13. Zhang Zhongzhi, Zhou Shuigeng, Shen Zhen, Guan Jihong. From regular to growing small-world networks. Physica A, 385: 765-772, 2007.
  14. Zhongzhi Zhang, Shuigeng Zhou, and Jihong Guan. Scale-free Networks by Clique Evolution. Dynamics of Continuous, Discrete and Impulsive Systems (B) (in press), 2007
  15. Yuzhen Li, Jianming Lu, Jihong Guan, Takashi Yahagi, Ayman Haggag. GML Topology Data Analysis and Storage Schema Design. Journal of Advanced Computational Intelligence and Intelligent Informatics (JACIII), Vol. 11, No. 6, 2007.
  16. Lin Zhu, Jihong Guan, Shuigeng Zhou . CWC: A Clustering-Based Feature Weighting Approach for Text Classification, Proceedings of MDAI 2007, LNAI 4617, pp. 204–215, 2007.
  17. Da Jiang, Shuigeng Zhou, and Jihong Guan. A Novel Method for Flux Distribution Computation in Metabolic Networks. Proceedings of 1st International Conference on Bioinformatics Research and Development (BIRD 2007), LNBI, vol.4414, pp. 154–167, Springer, Mar. 2007.
  18. Hekang Chen, Shuigeng Zhou, and Jihong Guan. Towards Energy-Efficient Skyline Monitoring in Wireless Sensor Networks. Proceedings of 4th European Conference on Wireless Sensor Networks (EWSN 2007), LNCS, pp.101-116, Springer, Jan. 2007.
  19. Fubao Zhu, Jihong Guan, and Shuigeng Zhou. Constraints-preserving GML Storage in Object-Relational Databases. Proceedings of ACM-GIS 2007, pp. 348-351, November 2007.
  20. Jiaogen Zhou, Jihong Guan and Pingxiang Li. DCAD: a dual clustering algorithm for distributed spatial databases. Geo-Spatial Information Science, 10(2): 137-144, 2007.
  21. Yanglan Gan, Jihong Guan, Hao Wang. A Fast Subspace Clustering Algorithm Based on Pattern Similarity. In Proceedings of 4th International Conference on Fuzzy Systems and Knowledge Discovery (FSKD2007), IEEE CS, vol. 3: 253-257, 2007.
  22. Jiaogen Zhou, Fuling Bian, Jihong Guan. Fast implementation of dual clustering algorithm for spatial database. Proceedings of 4th International Conference on Fuzzy Systems and Knowledge Discovery (FSKD'07), IEEE CS, August 2007.
  23. Lin Zhu, Shuigeng Zhou, Jihong Guan. Efficient Skyline Retrieval on Peer-to-Peer Networks. In: Proceedings of FGCN 2007, vol. 2, pp. 309-314, IEEE CS, Dec. 2007.
  24. Ming Xu, Jihong Guan. Routing Based Load Balance for Unstructured P2P Networks. In: Proceedings of FGCN 2007, vol. 2, pp. 332-337, IEEE CS, Dec. 2007.
  25. Qinliang Jiang and Jihong Guan. A Peer-to-Peer Based Text Sharing and Retrieval System. In: Proceedings of FGCN 2007, vol. 2, pp. 338-343, IEEE CS, Dec. 2007.
  26. Fubao Zhu, Jihong Guan, Shuigeng Zhou. GML-based Spatial Information Services for LBS. In Proceedings of LBS2007, 2007.
  27. 蔚赵春,周水庚, 关佶红. 无线传感器网络中数据存储与访问研究进展.电子学报, 已录用, 待发表, 2007.
  28. 朱琳, 关佶红, 周水庚. Skyline计算研究综述.计算机工程与应用, 已录用, 待发表, 2007.
  29. 朱琳, 关佶红, 周水庚. 基于结构化对等网络的skyline计算.计算机应用与软件, 已录用, 待发表, 2007.
  30. 朱付保, 关佶红, 周水庚. 基于区间编码的GML索引与查询.计算机科学, 卷:35期:3页:65-67,83已录用, 2007.
  31. 杜成龙, 关佶红, 王治. GML数据流压缩算法研究.《计算机工程》, 卷:33 期:1 页:98-100 2007

2006 (SCI/SCIE-2 , EI-6 , ISTP-1)

  1. Guan Jihong, Zhou Shuigeng, A Training-Corpus Pruning Based Approach for Fast Text Classification. Chinese Journal of Electronics
  2. Haoliang Jiang, Shuigeng Zhou, Jihong Guan, Ying Zheng. gTRICLUSTER: A More General and Effective 3D Clustering Algorithm for Gene-Sample-Time Microarray Data. Proceedings of the 1st International Workshop on Biomedical Data Mining (BioDM’06), LNBI, vol. 3916, pp. 48-59, Springer, 2006.
  3. Jiaogen Zhou, Jihong Guan, Fubao Zhu, Shuigeng Zhou. Ontology-based semantic integration GML Spatial information. Proceeding of International Conference on Geoinformatics 2006, vol. 6420H, pp.1-12, SPIE, Wuhan, China, October 2006.
  4. Jiaogen Zhou, Jihong Guan, Fuling Bian. Dual clustering algorithm for spatial data mining. Journal of Computational Information Systems, 2(4): 1405-1410, 2006.
  5. Jihong Guan, Jiaogen Zhou, Fubao Zhu. Scalable and visualization-oriented clustering for exploratory spatial analysis. Journal of Computational Information Systems, 2(4): 1391-1398, 2006.
  6. Yang An, Bo Zhao, Jihong Guan. Ontology-based Description and Discovery of GIS Services. Journal of Computational Information Systems, 1(4): 951-958, 2005.
  7. Guan Jihong, Zhu Fubao, Zhou Jiaogen, Niu Liping. GQL: Extending XQuery to query documents. Geo-Spatial Information Science, 9(2): 118-126, 2006.
  8. Fubao Zhu, Jihong Guan, Jiaogen Zhou, Shuigeng Zhou. Storing and querying GML documents in object-relational databases. Proceedings of ACM-GIS 2006, pp. 107-114, ACM, November 2006.
  9. Hekang Chen, Shuigeng Zhou, Bin Xiao, Jihong Guan, Bo Huang. A Novel Energy-Efficient Backbone for Sensor Networks. Proceedings of 2nd International Conference on Mobile Ad Hoc and Sensor Networks (MSN 2006), LNCS, vol. 4325, Hong Kong, China, pp.600-611, 13-15 Dec. 2006.
  10. 朱付保, 关佶红, 周水庚. 基于模型映射的GML文档存储和查询方法. 《计算机研究与发展》,Vol. 43, Suppl. 510-516, 2006年11月.
  11. Yuzhen Li, Jianming Lu, Jihong Guan, Takashi Yahagi, Ayman Haggag. GML Topology Data Analysis and Storage Schema Design. In Proceedings of Joint 3rd International Conference on Soft Computing and Intelligent Systems and 7th International Symposium on advanced Intelligent Systems (SCIS & ISIS 2006). Tokyo, Japan, September 20-24, 2006. pp. 2119–2124 [Tokyo Institute of Technology, Japan Society for Fuzzy Theory and Intelligent Informatics, ISSN 1880–3741]
  12. 安杨, 边馥苓, 关佶红. GIS中地理本体的建立与比较. 《武汉大学学报(信息科学版)》, 31(12):1108-1111, 2006. ISSN 1671-8860.